ML Research Wiki / Benchmarks / Named Entity Recognition (NER) / BC2GM

BC2GM

Named Entity Recognition (NER) Benchmark

Performance Over Time

📊 Showing 11 results | 📏 Metric: F1

Top Performing Models

Rank Model Paper F1 Date Code
1 Spark NLP Biomedical Named Entity Recognition at Scale 88.75 2020-11-12 📦 JohnSnowLabs/spark-nlp-workshop
2 BioDistilBERT On the Effectiveness of Compact Biomedical Transformers 86.97 2022-09-07 📦 nlpie-research/compact-biomedical-transformers
3 CompactBioBERT On the Effectiveness of Compact Biomedical Transformers 86.71 2022-09-07 📦 nlpie-research/compact-biomedical-transformers
4 DistilBioBERT On the Effectiveness of Compact Biomedical Transformers 86.60 2022-09-07 📦 nlpie-research/compact-biomedical-transformers
5 HGN Hero-Gang Neural Model For Named Entity Recognition 85.65 2022-05-15 📦 jinpeng01/hgn
6 BioMobileBERT On the Effectiveness of Compact Biomedical Transformers 85.26 2022-09-07 📦 nlpie-research/compact-biomedical-transformers
7 BioLinkBERT (large) LinkBERT: Pretraining Language Models with Document Links 85.18 2022-03-29 📦 michiyasunaga/LinkBERT
8 KeBioLM Improving Biomedical Pretrained Language Models with Knowledge 85.10 2021-04-21 📦 GanjinZero/KeBioLM
9 PubMedBERT uncased Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing 84.52 2020-07-31 📦 bionlu-coling2024/biomed-ner-intent_detection 📦 rohanshad/cmr_transformer
10 BERN2 BERN2: an advanced neural biomedical named entity recognition and normalization tool 83.70 2022-01-06 📦 dmis-lab/bern2

All Papers (11)

JohnSnowLabs/spark-nlp-workshop
nlpie-research/compact-biomedical-transformers
nlpie-research/compact-biomedical-transformers
nlpie-research/compact-biomedical-transformers
jinpeng01/hgn
nlpie-research/compact-biomedical-transformers
michiyasunaga/LinkBERT
GanjinZero/KeBioLM
bionlu-coling2024/biomed-ner-intent_detection rohanshad/cmr_transformer
dmis-lab/bern2
universal-ner/universal-ner emma1066/retrieval-augmented-it-openner