Placenta

Dataset Information
Modalities
Graphs, Biomedical, Medical
Introduced
2022
License
Homepage

Overview

Placenta is a benchmark dataset for node classification in an underexplored domain: predicting microanatomical tissue structures from cell graphs in placenta histology whole slide images. Cell graphs are large (>1 million nodes per image), node features are varied (64-dimensions of 11 types of cells), class labels are imbalanced (9 classes ranging from 0.21% of the data to 40.0%), and cellular communities cluster into heterogeneously distributed tissues of widely varying sizes (from 11 nodes to 44,671 nodes for a single structure).

Source: A New Graph Node Classification Benchmark: Learning Structure from Histology Cell Graphs

Image Source: https://arxiv.org/pdf/2211.06292v1.pdf

Variants: Placenta

Associated Benchmarks

This dataset is used in 1 benchmark:

Recent Benchmark Submissions

Task Model Paper Date
Node Classification GraphSAGE A New Graph Node Classification … 2022-11-11
Node Classification SIGN A New Graph Node Classification … 2022-11-11
Node Classification ClusterGCN A New Graph Node Classification … 2022-11-11
Node Classification GraphSAINT A New Graph Node Classification … 2022-11-11
Node Classification ShaDow A New Graph Node Classification … 2022-11-11

Research Papers

Recent papers with results on this dataset: