iRodent Animal Pose Estimation
Description: The "iRodent" dataset contains rodent species observations obtained using the iNaturalist API, with a focus on Suborder Myomorpha (Taxon ID: 16). The dataset features prominent rodent species like Muskrat, Brown Rat, House Mouse, Black Rat, Hispid Cotton Rat, Meadow Vole, Bank Vole, Deer Mouse, White-footed Mouse, and Striped Field Mouse. The dataset provides manually labeled keypoints for pose estimation and segmentation masks for a subset of images using a Mask R-CNN model.
If you use this data, please cite:
Ye, S., Filippova, A., Lauer, J. et al. SuperAnimal pretrained pose estimation models for behavioral analysis. Nat Commun 15, 5165 (2024). https://doi.org/10.1038/s41467-024-48792-2
Creator: Adaptive Intelligence Lab at EPFL: https://www.mackenziemathislab.org/
Data Format: COCO format
Number of Images: 443
Species: Muskrat, Brown Rat, House Mouse, Black Rat, Hispid Cotton Rat, Meadow Vole, Bank Vole, Deer Mouse, White-footed Mouse, Striped Field Mouse
Image Resolution: Varied (800x600 to 5184x3456 pixels)
Annotations: Pose keypoints and generated segmentation masks by Tian Qiu and Mackenzie Mathis.
License: Apache 2.0
Keywords: animal pose estimation, behaviour analysis, keypoints, rodent
Contact: Mackenzie Mathis
Email: [email protected]
Variants: iRodent
This dataset is used in 1 benchmark:
| Task | Model | Paper | Date |
|---|---|---|---|
| 2D Pose Estimation | fine-tuned HRNetw32 pretrained on SuperAnimal (1 fac of data) | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
| 2D Pose Estimation | fine-tuned HRNetw32 pretrained on AP-10K (1 fac of data) | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
| 2D Pose Estimation | fine-tuned HRNetw32 pretrained on SuperAnimal (0.01 fac of data) | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
| 2D Pose Estimation | fine-tuned HRNetw32 pretrained on ImageNet | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
| 2D Pose Estimation | zero-shot HRNet-w32 pretrained on SuperAnimal-Quadruped | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
| 2D Pose Estimation | zero-shot AnimalTokenPose pretrained on AP-10K | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
| 2D Pose Estimation | fine-tuned HRNetw32 pretrained on AP-10K (0.01 fac of data) | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
| 2D Pose Estimation | zero-shot HRNet-w32 pretrained on AP-10K | SuperAnimal pretrained pose estimation models … | 2022-03-14 |
Recent papers with results on this dataset: